GalaxyTongDock_D

Homo-oligomer structure of a protein with Dn symmetry is predicted. Docking of a monomer (subunit 1) and a copy of monomer (subunit 2) is performed first, structures for half (Cn symmetry) of the full oligomer are constructed from that, and two half structures (half 1 and half 2) are docked to form Dn symmetry. Use GalaxyTongDock_C for Cn symmetry.

User Information
Job name
E-mail address (Optional)
Protein Information
Monomer structure
(≤1000 AA)

Protein Structure File (allowed file extensions: pdb, txt)
Oligomeric state
(≤12)

Number of monomers. For example, oligomeric state of D2 symmetry is 4.
Block (Optional)
Block residues
Residue numbers or residue ranges (e.g. 52-60) should be separated by commas.
(example: 18,52-60,78,111-131)
C-Interface (Optional)
C-Interface 1 subunit 1 , subunit 2
C-Interface 2 subunit 1 , subunit 2
C-Interface 3 subunit 1 , subunit 2
C-Interface 4 subunit 1 , subunit 2
C-Interface 5 subunit 1 , subunit 2
The number of specified residues for each of subunit 1 and subunit 2 should be less than 200.
Residue numbers or residue ranges (e.g. 52-60) should be separated by commas.
(example: 18,52-60,78,111-131)
D-Interface (Optional)
D-Interface 1 half 1 , half 2
D-Interface 2 half 1 , half 2
D-Interface 3 half 1 , half 2
D-Interface 4 half 1 , half 2
D-Interface 5 half 1 , half 2
The number of specified residues for each of half 1 and half 2 should be less than 200.
Residue numbers or residue ranges (e.g. 52-60) should be separated by commas.
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